From: AGOUTI: improving genome assembly and annotation using transcriptome data
 |  | Number of contig pairs scaffolded | ||||
---|---|---|---|---|---|---|
Assembly | K | Total | Case 1 | Case 2 | Case 3 | Case 4 |
CE1 | 2 | 3,671 | 3,427 | 92 (74)a | 75 (57) | 77 (67) |
5 | 2,994 | 2,858 | 56 (40) | 56 (40) | 24 (21) | |
CE2 | 2 | 2,660 | 2,463 | 72 (55) | 47 (34) | 78 (68) |
5 | 2,184 | 2,072 | 39 (29) | 39 (26) | 34 (27) | |
CE3 | 2 | 2,093 | 1,928 | 59 (44) | 42 (33) | 64 (60) |
5 | 1,699 | 1,611 | 36 (24) | 25 (20) | 27 (25) | |
CE4 | 2 | 1,822 | 1,697 | 50 (39) | 32 (26) | 43 (38) |
5 | 1,486 | 1,424 | 24 (16) | 26 (21) | 12 (10) | |
CE5 | 2 | 1,302 | 1,215 | 41 (34) | 20 (18) | 26 (21) |
5 | 1,054 | 1,011 | 18 (13) | 13 (13) | 12 (8) | |
CE6 | 2 | 624 | 582 | 22 (19) | 6 (5) | 14 (10) |
5 | 501 | 483 | 10 (7) | 4 (4) | 4 (1) |